RoseTTAFoldNARoseTTAFold2NA is an open-source deep learning model for predicting 3D structures of protein-DNA and protein-RNA complexes, developed by UW IPD.(0)0
RDKitRDKit is a free, open-source cheminformatics toolkit with Python and C++ APIs for molecular processing, fingerprinting, QSAR modeling, and drug discovery workflows.(0)0
OpenSoundscapeOpenSoundscape is a free, open-source Python library for bioacoustic data analysis, featuring CNN training, spectrogram tools, automated sound detection, and acoustic localization.(0)0
Meta ESMOpen-source pretrained language models for protein sequences. Enables protein structure prediction, mutational effect analysis, and generative protein design using transformer-based architectures.(0)0
QuivrQuivr is an opinionated open-source RAG framework supporting any LLM (GPT-4, Groq, Llama) and vectorstore (PGVector, Faiss). Build AI-powered apps faster without reinventing retrieval pipelines.(0)0
TensorFlow LiteLiteRT (formerly TensorFlow Lite) is Google's open-source framework for deploying ML and GenAI models on Android, iOS, web, desktop, and IoT devices with GPU/NPU acceleration.(0)0
TopazTopaz is an open-source deep learning pipeline for automated particle picking and denoising in cryo-electron microscopy images using CNNs trained on positive-unlabeled examples.(0)0
MatterSimMatterSim is Microsoft's open-source deep learning atomistic model for simulating material properties across elements, temperatures, and pressures using M3GNet architecture.(0)0
Crawl4AICrawl4AI is an open-source web crawler and scraper built for LLMs, AI agents, and data pipelines. Generate clean markdown, extract structured data, and crawl at scale.(0)0
Oxford Nanopore EPI2MEEPI2ME provides open-source, best-practice bioinformatics workflows for nanopore sequencing data analysis. Run pipelines locally on your desktop — no cloud upload required.(0)0
